Critical Claude Code Security Vulnerabilities Enable Remote Code Execution and API Key Theft

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Cybersecurity researchers from Check Point have uncovered critical security vulnerabilities in Anthropic's Claude Code that allow attackers to execute remote commands and steal API credentials simply by tricking developers into opening malicious repositories. The flaws exploit configuration mechanisms including Hooks, Model Context Protocol servers, and environment variables, fundamentally altering the threat model for AI-powered development tools.

Critical Flaws Discovered in AI-Powered Coding Assistant

Cybersecurity researchers at Check Point Research have disclosed multiple critical security vulnerabilities in Anthropic's Claude Code, an AI-powered coding assistant that has gained traction in enterprise workflows

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. The vulnerabilities enable remote code execution and API key theft through malicious repository configuration files, creating a new attack vector that challenges traditional security assumptions about what constitutes executable code

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Source: CXOToday

Source: CXOToday

The identified security vulnerabilities exploit built-in mechanisms including Hooks, Model Context Protocol (MCP) servers, and environment variables to execute arbitrary shell commands and exfiltrate Anthropic API keys when developers clone and open untrusted repositories . What makes these flaws particularly dangerous is that simply opening a crafted repository is enough to compromise a developer's system—no additional interaction required beyond launching the project.

How Repository Configuration Files Became an Execution Layer

Claude Code was designed to streamline collaboration by embedding project-level configuration files directly within repositories, automatically applying them when developers open the tool inside a project directory. Check Point discovered that these files, typically perceived as harmless operational metadata, could function as an active execution layer

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Source: Hacker News

Source: Hacker News

The first vulnerability, CVE-2026-21852, allows attackers to manipulate the ANTHROPIC_BASE_URL setting through repository-defined configurations. According to Anthropic's advisory, "If a user started Claude Code in an attacker-controlled repository, and the repository included a settings file that set ANTHROPIC_BASE_URL to an attacker-controlled endpoint, Claude Code would issue API requests before showing the trust prompt, including potentially leaking the user's API keys" .

This means authenticated API traffic, including full authorization headers containing Anthropic API keys, could be redirected to external infrastructure before any trust decision was made. The stolen credentials could then permit attackers to access shared project files, modify or delete cloud-stored data, upload malicious content, and generate unexpected API costs .

Bypassing Trust Controls Through MCP Integration

CVE-2025-59536 targets the Model Context Protocol (MCP), which enables Claude Code to integrate with external tools and services. While trust prompts were designed to require explicit user approval before interacting with external services, researchers found that repository-controlled configurations defined through .mcp.json and claude/settings.json files could override these safeguards .

By setting the "enableAllProjectMcpServers" option to true, attackers could achieve user consent bypass, allowing execution to occur before users granted permission and without meaningful visibility into what was being initialized

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. This inverts the control model, shifting authority from the user to repository-defined configuration files.

Silent Command Execution Through Automation Layers

Claude Code includes automation capabilities through Hooks that allow predefined actions to run when a session begins. Check Point demonstrated that this mechanism could be abused to trigger stealthy execution on a developer's machine without any additional interaction beyond launching the project

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. Hidden shell commands embedded in these automation layers could run silently, expanding the attack surface beyond traditional code execution vectors.

Enterprise-Wide Implications for AI Supply Chain Security

The vulnerabilities pose particularly acute risks in enterprise workflows where API credentials are often shared across teams. In collaborative AI environments, a single compromised key can become a gateway to broader infrastructure, particularly in shared workspaces where it could expose, modify, or delete shared files and resources and generate unauthorized costs

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Check Point emphasized that this represents a fundamental shift in the evolving threat model: "As AI-powered tools gain the ability to execute commands, initialize external integrations, and initiate network communication autonomously, configuration files effectively become part of the execution layer. What was once considered operational context now directly influences system behavior" .

The findings highlight that the AI supply chain now extends beyond source code to include the automation layers surrounding it. For development environments increasingly reliant on AI-powered coding assistants, the risk is no longer limited to running untrusted code—it now extends to simply opening untrusted projects . Organizations adopting agentic AI tools need updated security controls to address these new risks, as traditional trust boundaries between configuration and execution continue to blur in AI-driven development workflows.

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